An untrained deep learning method for reconstructing dynamic magnetic resonance images from accelerated model-based data

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Kalina P. Slavkova, Julie C. DiCarlo, Viraj Wadhwa, Chengyue Wu, John Virostko, Sidharth Kumar, Thomas E. Yankeelov, Jonathan I. Tamir

Magnetic Resonance in Medicine, vol. 89(4), 2023, pp. 1617-1633

Mathematical modelling of the dynamics of image-informed tumor habitats in a murine model of glioma

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Kalina P. Slavkova, Sahil H. Patel, Zachary Cacini, Anum S. Kazerouni, Andrea L. Gardner, Thomas E. Yankeelov, David A. Hormuth II

Scientific Reports, vol. 13, 2023, p. 2916

Combining radiomic features with background parenchymal enhancement from DCE-MRI data for predicting treatment response in breast cancer

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Kalina P. Slavkova, Eric A Cohen, Rhea Chitalia, Snekha Thakran, Walter C Mankowski, Alex Nguyen, Hannah Horng, Elizabeth S McDonald, Michael D Feldman, Angela DeMichele, Despina Kontos

International Society for Magnetic Resonance in Medicine, 2023

Integrating mechanism-based modeling with biomedical imaging to build practical digital twins for clinical oncology.

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Chengyue Wu, Guillermo Lorenzo, II David A. Hormuth, Ernesto A. B. F. Lima, Kalina P. Slavkova, Julie C. DiCarlo, John Virostko, Caleb M. Phillips, Debra Patt, Caroline Chung, Thomas E. Yankeelov

Biophysics Reviews, vol. 3, 2022, p. 021304

Analysis of Simplicial Complexes to Determine When to Sample for Quantitative DCE-MRI of the Breast.

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Julie C. DiCarlo, Angela M. Jarrett, Anum S. Kazerouni, John Virostko, Anna G. Sorace, Kalina P. Slavkova, Deborah Patt, Boone Goodgame, Stephanie Woodard, Sarah Avery, Thomas E. Yankeelov

Magnetic Resonance in Medicine, vol. 89(3), 2022 Feb, pp. 1134-1150

Quantitative multiparametric MRI predicts response to neoadjuvant therapy in the community setting

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John Virostko, Anna G. Sorace, Kalina P. Slavkova, Anum S. Kazerouni, Angela M. Jarrett, Julie C. DiCarlo, Stefanie Woodard, Sarah Avery, Boone Goodgame, Debra Patt, Thomas E. Yankeelov

Breast Cancer Research, vol. 23(1), 2021

Characterizing Errors in Pharmacokinetic Parameters from Analyzing Quantitative Abbreviated DCE-MRI Data in Breast Cancer

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Kalina P. Slavkova, Julie C. DiCarlo, Anum S. Kazerouni, John Virostko, Anna G. Sorace, Debra Patt, Boone Goodgame, Thomas E. Yankeelov

Tomography, vol. 7(3), 2021, pp. 253-267

Modeling cell line-specific recruitment of signaling proteins to the insulin-like growth factor 1 receptor

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Keesha E. Erickson, Oleksii S. Rukhlenko, Md Shahinuzzaman, Kalina P. Slavkova, Yen Ting Lin, Ryan Suderman, Edward C. Stites, Marian Anghel, Richard G. Posner, Dipak Barua, Boris N. Kholodenko, William S. Hlavacek

PLoS Computational Biology, vol. 15(1), 2019, pp. e1006706