Kalina P. Slavkova, PhD

Physicist | Exploring the Intersection of AI, Physics, & Imaging

Radiomics on MRI for breast cancer risk stratification


Fig 1. Radiomic analysis pipeline on breast MRI. After computing features, the radiomic feature space is summarized through PCA and unsupervised clustering.

ML models of radiomics on MRI predict upstage of pre-cancerous breast lesions to invasive breast cancer on surgery.

  • Background: Ductal carcinoma in situ (DCIS) is a non-lethal, non-invasive precancerous breast lesion that can exist with or recur as invasive breast cancer. While roughly a quarter of DCIS cases upstage to invasive disease, a majority of patients diagnosed with DCIS undergo surgery and radiation therapy, up to half of which are over-treated. Thus, there is a need for robust risk stratification strategies that can identify patients at low risk of upstaging that can instead be monitored instead of subjected to aggressive treatments. 
  • Methods: In a multicenter trial, we compute radiomic features on MRI and summarize the feature space through hierarchical clustering (i.e., radiomic phenotyping) and principal component (PC) analysis. From there, we build logistic regression models of disease upstaging by combining the top radiomic PCs and radiomic phenotypes with clinical factors. 
  • Results: The logistic regression model parameterized by the top 3 radiomic PCs and clinical factors enabled the identification of an additional 25% true negatives (no disease upstaging) compared to models with clinical factors alone. Radiomic features therefore show promise in risk stratification among DCIS patients, which may allow low risk patients to be confidently identified for less aggressive treatment like active surveillance. 

Radiomics on MRI are associated with minimal residual disease in bone marrow aspirate samples in post-treatment patients.

[Under construction]

Publications


MRI Radiomic phenotypes derived from the ECOG-ACRIN E4112 Trial to assess high-risk ductal carcinoma in situ


Kalina Slavkova, Ruya Kang, Vivian Belenky, Anum Kazerouni, Debosmita Biswas, Hannah Horng, Rhea Chitalia, Michael Hirano, Jennifer Xiao, Ralph Corsetti, Sarah Javid, Derrick Spell, Antonio Wolff, Joseph Sparano, Seema Khan, Christopher Comstock, Justin Romanoff, Jon Steingrimsson, Constantine Gatsonis, Constance Lehman, Savannah Partridge, Despina Kontos, Habib Rahbar

vol. 84(9), American Association for Cancer Research, San Antonio Breast Cancer Symposium, 2024 May 1


Combining radiomic features with background parenchymal enhancement from DCE-MRI data for predicting treatment response in breast cancer


Kalina P. Slavkova, Eric A Cohen, Rhea Chitalia, Snekha Thakran, Walter C Mankowski, Alex Nguyen, Hannah Horng, Elizabeth S McDonald, Michael D Feldman, Angela DeMichele, Despina Kontos

International Society for Magnetic Resonance in Medicine, 2023


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